Pumpkin Spice Muffins with Cream Cheese Filling
Pumpkin spice muffins with cream cheese filling are the perfect treat to warm your heart this fall. These delightful muffins are moist, flavorful, and topped with a crunchy pecan layer. Ideal for cozy gatherings or a simple afternoon snack, they combine the rich taste of pumpkin with a creamy surprise. Get ready to impress your family and friends with these mouthwatering muffins!

Why You’ll Love This Recipe
- Deliciously Flavorful: Enjoy the warm spices of fall combined with the creamy richness of cream cheese.
- Perfect for Any Occasion: Whether it’s a holiday gathering, brunch, or just a snack at home, these muffins fit right in.
- Easy to Make: With straightforward steps, this recipe is great for both beginner and experienced bakers.
- Customizable Toppings: Feel free to add your favorite nuts or drizzles for an extra touch.
- Moist and Tender: Thanks to pumpkin puree and cream cheese, each bite is soft and satisfying.
Tools and Preparation
Before you start baking, gather your tools for making pumpkin spice muffins with cream cheese filling. Having everything ready will make the process smooth and enjoyable.
Essential Tools and Equipment
- Muffin tin
- Mixing bowls
- Electric mixer
- Measuring cups
- Measuring spoons
- Spatula
Importance of Each Tool
- Muffin tin: Ensures uniform shape and size for all muffins.
- Electric mixer: Makes it easy to achieve a smooth cream cheese filling and well-mixed batter.
- Spatula: Perfect for scraping down sides of bowls and ensuring every bit of deliciousness is used.
Ingredients
For the Muffins
- 1 cup pecans (chopped)
- 1 teaspoon vanilla extract
- 2 teaspoons sugar
- 3 teaspoons corn syrup
- ½ cup brown sugar (packed)
- ¼ teaspoon salt
- 2 tablespoons sugar
- 2 tablespoons brown sugar (packed)
- ½ teaspoon cinnamon, ground
- 2 ½ cups all purpose flour
- 2 cups sugar
- 2 tablespoons pumpkin pie spice
- 2 teaspoons baking powder
- 1 teaspoon salt
- 1 cup pumpkin puree (canned, unsweetened)
- ½ cup unsalted butter (melted)
- 2 large eggs
- ¼ cup milk
- 2 teaspoons vanilla extract
For the Cream Cheese Filling
- 4 ounces cream cheese (room temperature)
- ⅓ cup powdered sugar (or icing sugar)
- 1 tsp. vanilla extract
How to Make Pumpkin Spice Muffins with Cream Cheese Filling
Step 1: Preheat the Oven
Preheat your oven to 350°F (175°C). This step is essential to ensure that your muffins bake evenly.
Step 2: Prepare the Muffin Tin
Grease your muffin tin or line it with paper liners to prevent sticking. This helps in easy removal after baking.
Step 3: Make the Cream Cheese Filling
In a mixing bowl, combine:
1. The room temperature cream cheese,
2. Powdered sugar,
3. Vanilla extract.
Use an electric mixer on medium speed until smooth and creamy. Set aside.
Step 4: Mix Dry Ingredients
In another bowl, whisk together:
1. All-purpose flour,
2. Baking powder,
3. Cinnamon,
4. Pumpkin pie spice,
5. Salt.
This ensures even distribution of dry ingredients in your muffin batter.
Step 5: Combine Wet Ingredients
In a separate large bowl, mix:
1. Melted butter,
2. Brown sugar,
3. Granulated sugar,
4. Eggs,
5. Milk,
6. Pumpkin puree,
7. Vanilla extract.
Stir until fully combined.
Step 6: Combine Dry & Wet Ingredients
Gradually add the dry ingredient mixture into the wet mixture:
1. Stir gently until just combined.
2. Avoid overmixing; lumps are okay.
Step 7: Assemble Muffins
Fill each muffin cup about halfway with batter:
1. Add a spoonful of cream cheese filling on top.
2. Cover with more batter until nearly full—about three-fourths full.
Step 8: Add Topping
Sprinkle chopped pecans on top of each muffin before baking.
Step 9: Bake
Place in preheated oven and bake for about 35 minutes or until a toothpick inserted comes out clean.
Step 10: Cool & Serve
Allow muffins to cool in the pan for about 10 minutes before transferring them to a wire rack to cool completely.
Enjoy your homemade pumpkin spice muffins with cream cheese filling! They’re sure to be a hit at any gathering!
How to Serve Pumpkin Spice Muffins with Cream Cheese Filling
Serving pumpkin spice muffins with cream cheese filling can elevate your dessert experience. Whether it’s a cozy gathering or a simple treat for yourself, these muffins are versatile and delicious.
Pair with Coffee
- A warm cup of coffee complements the spices in the muffins perfectly, enhancing their flavor.
Add a Scoop of Ice Cream
- Vanilla or cinnamon ice cream on top creates a delightful contrast against the warm muffins.
Drizzle with Maple Syrup
- A light drizzle of maple syrup adds extra sweetness and an autumnal touch to each bite.
Enjoy with Whipped Cream
- Top your muffins with whipped cream for a light and airy texture that balances the richness of the cream cheese filling.
Serve at Brunch
- These muffins are a fantastic addition to any brunch spread, bringing warmth and flavor to the table.

How to Perfect Pumpkin Spice Muffins with Cream Cheese Filling
To ensure your pumpkin spice muffins are moist and flavorful, consider these helpful tips.
- Use fresh pumpkin puree: Fresh puree often has more flavor than canned, making your muffins taste better.
- Don’t overmix the batter: Overmixing can lead to dense muffins; mix until just combined for lighter results.
- Room temperature ingredients: Using room temperature eggs and cream cheese helps create a smoother batter.
- Check doneness carefully: Insert a toothpick in the center; it should come out clean when done.
- Cool before serving: Allowing muffins to cool slightly enhances their flavors and textures.
Best Side Dishes for Pumpkin Spice Muffins with Cream Cheese Filling
Pairing side dishes with your pumpkin spice muffins can create a well-rounded meal. Here are some options that complement their flavors beautifully.
-
Spiced Hot Apple Cider
The warmth of spiced cider pairs wonderfully with the muffins’ flavors, enhancing the fall theme. -
Creamy Yogurt Parfait
Layer yogurt with granola and fruit for a refreshing side that balances sweetness. -
Savory Quiche
A slice of quiche provides protein and savory notes, making it a hearty companion to sweet muffins. -
Fruit Salad
A light fruit salad adds freshness and acidity, brightening up the rich flavors of the muffins. -
Cheese Platter
Include assorted cheeses for contrasting textures and flavors that work well alongside sweet treats. -
Chai Tea
The spices in chai tea echo those in pumpkin spice, creating a harmonious pairing that’s perfect for fall.
Common Mistakes to Avoid
When making pumpkin spice muffins with cream cheese filling, it’s easy to make mistakes. Here are a few common pitfalls and how to avoid them.
- Skipping the Cream Cheese Preparation: Make sure your cream cheese is at room temperature before mixing. Cold cream cheese can create lumps, affecting the texture of the filling.
- Overmixing the Batter: Mixing too much can lead to dense muffins. Stir until just combined for light and fluffy results.
- Using Incorrect Measurements: Always measure your ingredients accurately. A kitchen scale can help ensure you get the right amounts, especially for flour and sugar.
- Not Testing for Doneness: Use a toothpick inserted into the center of a muffin to check if they’re done. If it comes out clean or with a few crumbs, they are ready.
- Ignoring Storage Guidelines: Improper storage can dry out your muffins. Follow storage instructions carefully to maintain freshness.

Storage & Reheating Instructions
Refrigerator Storage
- Store muffins in an airtight container in the fridge.
- They will keep fresh for up to one week.
Freezing Pumpkin Spice Muffins with Cream Cheese Filling
- Wrap each muffin tightly in plastic wrap or aluminum foil.
- Place them in a freezer-safe bag or container; they will last up to three months.
Reheating Pumpkin Spice Muffins with Cream Cheese Filling
- Oven: Preheat your oven to 350°F (175°C). Place muffins on a baking sheet and heat for about 10 minutes.
- Microwave: Heat individual muffins on high for 15-20 seconds. Be careful not to overheat them, as they may become dry.
- Stovetop: Use a skillet on low heat, cover with a lid, and warm for about 5 minutes.
Frequently Asked Questions
Here are some frequently asked questions about pumpkin spice muffins with cream cheese filling.
What makes pumpkin spice muffins so special?
Pumpkin spice muffins have rich flavors that evoke fall and comfort. The cream cheese filling adds an extra layer of sweetness and creaminess, making them irresistible.
Can I customize my pumpkin spice muffins?
Yes! You can add nuts, chocolate chips, or dried fruit for added flavor and texture. Experiment with spices like nutmeg or ginger for a unique twist.
How do I know when my muffins are done?
Insert a toothpick into the center of a muffin; if it comes out clean or with a few crumbs, they’re done baking.
Can I use fresh pumpkin instead of canned?
Absolutely! Fresh pumpkin can be used; just make sure it’s pureed smoothly before mixing it into your batter.
Final Thoughts
These pumpkin spice muffins with cream cheese filling are perfect for any occasion. Their warm spices and creamy center make them delightful treats that everyone will love. Feel free to customize them with your favorite mix-ins or toppings! Enjoy baking these cozy muffins this fall season!

Pumpkin Spice Muffins with Cream Cheese Filling
- Total Time: 50 minutes
- Yield: Approximately 12 servings 1x
Description
Indulge in the comforting flavors of fall with these Pumpkin Spice Muffins featuring a luscious cream cheese filling. Moist and flavorful, these delightful treats are topped with crunchy pecans, making them the perfect addition to any cozy gathering or a simple afternoon snack. The warm spices meld beautifully with the creamy center, promising to impress family and friends alike. Easy to make and customizable with your favorite toppings, these muffins are sure to become a seasonal favorite.
Ingredients
- 1 cup chopped pecans
- 1 cup pumpkin puree (canned, unsweetened)
- 4 ounces cream cheese (room temperature)
- 2 large eggs
- 2 cups granulated sugar
- 2 tablespoons pumpkin pie spice
- 2 ½ cups all-purpose flour
- 1 teaspoon vanilla extract
- 2 teaspoons sugar
- 3 teaspoons corn syrup
- ½ cup brown sugar (packed)
- ¼ teaspoon salt
- 2 tablespoons sugar
- 2 tablespoons brown sugar (packed)
- ½ teaspoon cinnamon, ground
- 2 teaspoons baking powder
- 1 teaspoon salt
- ½ cup unsalted butter (melted)
- ¼ cup milk
- 2 teaspoons vanilla extract
- ⅓ cup powdered sugar (or icing sugar)
Instructions
- Preheat your oven to 350°F (175°C) and grease a muffin tin.
- In a mixing bowl, blend cream cheese, powdered sugar, and vanilla until smooth; set aside.
- In another bowl, mix flour, baking powder, cinnamon, pumpkin pie spice, and salt.
- In a large bowl, combine melted butter, sugars, eggs, milk, pumpkin puree, and vanilla extract; stir until combined.
- Gradually add the dry ingredients to the wet mixture until just combined.
- Fill muffin cups halfway with batter, add cream cheese filling on top, then cover with more batter.
- Sprinkle chopped pecans on top and bake for about 35 minutes or until a toothpick comes out clean.
- Prep Time: 15 minutes
- Cook Time: 35 minutes
- Category: Dessert
- Method: Baking
- Cuisine: American
Nutrition
- Serving Size: 1 serving
- Calories: 250
- Sugar: 22g
- Sodium: 220mg
- Fat: 12g
- Saturated Fat: 4g
- Unsaturated Fat: 7g
- Trans Fat: 0g
- Carbohydrates: 34g
- Fiber: 1g
- Protein: 3g
- Cholesterol: 50mg